YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16555763
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKQIAGSKA LLLGSGFVTK PTVEVLSKAD VEVTVACRTL ESAQALASGF KNAKAISLDV  60
   61 NDDAALDAAL NQADVVISLI PYTFHATVIK SAIRTKTNVV TTSYVSPAMM ELDEQCREAG 120
  121 ITVMNEIGLD PGLDHLYAVK TIHEVHAAGG KVTGFVSFCG GLPAPECSNN PLGYKVSWSS 180
  181 RGVLLALRNA AKIYQDGKIV SIDGPDLMAT AKPFFIYPGF AFVGYPNRDS TPFRERYGIP 240
  241 EAQTVIRGTL RYQGFPEMIK VLVDIGFLND APNSVFDKAT SWKEATKQVL GATSSDEKDL 300
  301 HWAIASKTKF PNNDERDRLL SGLRWIGLFS DEQIIPRGNA LDTLCATLEQ KMQYGPGERD 360
  361 LVMLQHKFEI ENKDGSKETR TSTLCEYGNE VSSAMARTVG IPCGVAVKQV LDGTISKTGV 420
  421 IAPVTWDICA PLIKTLKEDY GMELIERTL

Type	Start	End	Confidence
Signal Peptide	1	27	0.62
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	449	0.99