YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54639805, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIVAVTGGI ATGKSTVSKV FERHGIPVID ADKIAREIVE PGQAAWEQIR ATFGEDVLLP  60
   61 SKEINRAVLA RMIFEDKELR GKLNQITHPK IHRKIFWRAF KLFVTGHSWI VLDLPLLFET 120
  121 GILMDFIYKI VCVSCDSDKQ LQRLIARNEL SEAEASHRIE SQMPLEKKCE QSHFVIDNNG 180
  181 SIEETEESAI RVVNMMKESK QHWRNRVYLL GLVMIVGFTI YMLLKIFGRV SD

Type	Start	End	Confidence
Cytoplasmic	1	205	0.81
Transmembrane Helix	206	227	0.91
Non-Cytoplasmic	228	232	0.68