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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125777997, gi...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLAGISIALL LLSTCSALYE DQIKKFDWRS VHVGALKQSR VDLNHFQPRL LVSTHEDVVA  60
   61 FLCPKTGSIL WRQVLEQKPR GDIKLLQVSG FSVDSSDTAA APIGTNLGFD MLTVQGHAPA 120
  121 LVRGWNTNIG TIEWEWSIMP LNSEKAQDAL WFYSNSILYH IVPAWRSHLE VTAYFASSGH 180
  181 STGSTSKIMA SWITRESCTL SGTFYVCVDS KQLISLDLVS KSTQVIRTAL ESEPQGKIEA 240
  241 VEGLNGVVIV DGKLVSVNKD QAVCGALQGS SYAVGSFNYR KIVVSADLTS GNLKINAAYL 300
  301 DNCSPVSELQ QTLQFPEHFG IPTLNSFDCK LKRSGDGKSC MFVFSTSSES IVAVQQGKVR 360
  361 WSREESLANV IDSQFMDLPL ADTEGTLESE MKGKAVDSTS FDRDIASAFL RRISTQAVQI 420
  421 RSLFLHVIGL GPPPTDTQRA GLVRDSFGLH KILVLLTRSG KIFGIDNISG KHHWQLYLPK 480
  481 VNAFDNAEQM HLIVQRTSKH FPLQPLCAIV AKNSINGNGV LYRFNPITGQ ATEGGLLHLD 540
  541 FKIKQLSLLA ETEKDFVKGI LIFDASNQVH VYPQHATPLA DGMYLYTADV KSAQLEGYFV 600
  601 KYAGGKLSCT HIWNARLGGH HSEQQIIAVA GKNPIEHVHS QGRVLGDRSV LYKYINPNLV 660
  661 AFVTQAPDAT HKSVLNLYLV DVVSGSVIFS MTHRKVRAPL SIVHSENWLA YSYFNEKVRR 720
  721 TEITTIELYE GKAQANSSVW SSLTAPPMPL VERQSYIIPA IVEALRETIT ERGITNKHVL 780
  781 IGTASGSIIE MPWHLLDPRR PIASTTQGRE EGAIPYIPEL PLPTESHINY NQTVARLRNI 840
  841 YTAPSGLEST CLVVATGLDL FVTRVAPSKT FDLLKEDFDY ILISIVLVAL TSGSLIVKHL 900
  901 ASRKLLKQAW K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle