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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54639529, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFRLAAFWL FLLTVGSGGG RGNHKQLSLD CCLGGHGHEA STWGVAAAAE SIAQRDGNSD  60
   61 SDKGNELENA LKLRATSKRK QTQVIGDITT RAHQSPEDAT TTLATASKSI GHQAVRRAKD 120
  121 ARNLEQHLKQ SVARLFTSDE ESNESDSGPG STLVTDATAT ATATATATTV TTHHPGRRHV 180
  181 VADKLQYTKE IQIKQGRLMG ITRRFQVTTG LREVDQYLGL PYAEAPTGSR RFMPPGAPLP 240
  241 WQGLKIARHL PPVCPQKLPD LTSHGSVNMS RARHKYLSRL LPYLRSEGED CLYLNLYVPH 300
  301 EESLVAPKQY AVLVYLHGES FEWNSGNAYD GSVLSSYGEV IVVTVNYRLG VLGFLRPSID 360
  361 AHNIANYALL DQIAALHWIK ENIGSFNGDN TRVTLMGHST GAACVNYLMV SPVASGLFHR 420
  421 AILMSGSAMS DWAASNQSLQ LTMQIAHALD CPLSDHFDAD DEDALLDCLR QRRYQDILHI 480
  481 PTSLQQFSTS LGPIVDGHVI PNQPYKVMGH YTEHFSRYDL LFGITESESY HTLAALALEE 540
  541 GLRENERDNL LRFYMQSRFD VRPDLALAAT LKKYQDMYNN PIKATNLEHR DVVLDILSDA 600
  601 RVVGPLLQTG MFHADVNRRN YMYVFGHNSA TGPYANLPHS IMGEELAFIF GAPLAPAGPF 660
  661 PSHNYTMQEK LLSEAVMAYW TNFVKTGNPK APWKGIFLNS HALEWDRYDL DWPEFNKRAQ 720
  721 AYLNIGIPPT VGYKYRQIYM NFWNKELPDE LNQIAALQEQ LHPGSEVITG HMSQYGPRDK 780
  781 GAEDPVRTLK LLLQEPSLAN SPDSTETAAE NMYNAPPTFG HVMHKQQPQQ PQREEDLEMT 840
  841 SPTNPMAEDQ PETVAKSETT LQLLIALIAL IIALNVIIYG TFLMRQRRKR AKMLPFPGPK 900
  901 LNGNILSYDG ANDDELKRCS KSRDGDDSYV MDMARKSNTY EAIKTGQRSP INGYAIQRQL 960
  961 SCSTVDTHTK VCEWMSGQEV PKSGSFATPT ATTPTSVLPD GRMIICQDIE VADAALLIPQ1020
 1021 HMHEPQHYEM LLQRQHSALT EPSEDILQQQ LQHMPLHRHT HSDPVDMILA ADEQVTSFVH1080
 1081 ADDVDINVTS RDENCVLEVV PLTAAQQLEL LRQRNYPKVL PTAQDLRDSR GGNYKRNSLP1140
 1141 PQNFSAPLPP PRTISSTLGR RRRDSSNITT SPLQLAQDLA GEEEPGEPQI TENTLIFGPI1200
 1201 VPKSPATSLK RQKRTPEAGA PAAGAMTALS GSFQSFESVP PAHETTPPQG GERTECIYSI1260
 1261 EASPGTCPGN DGTSWSAPNG DLYAQPMKSP SRTSLIPRLT QQQPTPTPTP TPTPTPTPTP1320
 1321 SPHHHHQGAA EGEETSAVPG GASSMATTVS PTRIPQLLQR QASGKDLRIA NTASPLASQG1380
 1381 QQQQQQQQRT DSTISSGSSA SAASSTESST SSSSSSTNTV RTELQQHQHQ HQPGKSITTN1440
 1441 I

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