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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|198477561, gi...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMARSIFGR DHEGYVGRAE HTRKLQNLGS EDDLGELPPM MEELSVADGL RPNPGGPFSA  60
   61 LTASMWPQEI LAKLGGEAEL GSGPNDQPEY RFDEFGFRVE EEDGPEQSSN KLLGIPFVED 120
  121 AQQRLQWIAH LEFSHNKEAT ELTWEHVDVM LPRTEKLRNM VRQGIPHTLR AQMWMRLSGA 180
  181 LAKKQKSETS YQDIVKASSN DQLMTSKQIE KDLLRILPTN ACFSNPNGTG IPRLRRILRG 240
  241 IAWLFPDIGY CQGTGVIVAC LLLFMEEENA FWMMATIVED LLPASYYSST LLGIQADQRV 300
  301 MQTLIANYLT NVDESLKKHD IELSLITLHW FLTVFANVVH MKILVRIWDW FFYEGSIVLF 360
  361 QLTLGMLKVK EQELKHLENS AQIFNSLSDI PGEVTDVEVL FRQALEVGGS LSQTVIDTHR 420
  421 RRHLAYLMAD QGHQIGNPEA TSNLPKQQLA RRQVRKSKSI LEAFLFRGDG SEADQLKNKN 480
  481 IRQTEILVDL REAILKVGRH FITIEPKLAG HIQLTANYSS ESHAKDHENF INVARTRKRR 540
  541 AKALHDFERH DDDELGFRRN DIITIISQKD EHCWVGELNG LRGWFPAKFV ELLDERSKLY 600
  601 TSAGDDAISE TVTDLVRGTL APAIKAFLEH GMKRPTFLGG PIHPWLYIEE AATREVEKDF 660
  661 ESVYSRLVLC KTYRLDEDGK VLTPEELLYR CVQAINQTHD DAHAQMDVKL RSLICLGLNE 720
  721 QVLHLWLEVL CACQEVVQKW YHTWSFIDSP GWVQIKCELR ILSQFAFNLN PDWELPPKRG 780
  781 KESQPLKDGV RDMLVKHHLF SWDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle