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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125777465, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVTSASGVD STPTLGTVEV TTLLGVFFGV LVLLLLLFLY ISRKCCFHHR HGINCCDERH  60
   61 LAAKCVQKIT RKRRYENTSS DSEEDILRRL RWHQQNQHSD KPIGYGMSIS QANPLTAHSF 120
  121 NYHQSDADLQ RVTVTRDPLA IAERGKVGIP SSHSECSSND SMEASVDSHT GILTGETKAH 180
  181 PVTAFRNPYT DNRAKTHHSQ RYHHRVEVLP PKLEKDNAVV VMPEPLFDTS DLRSVKSDDM 240
  241 LVGDSKAPAS RGPIELEMSL LYDAPMRKMT VHVMQARCLP PLGNGQQTHT QVRMLMLPNK 300
  301 KQKHKTKIRS GENPQYMESF LLHRVNPEDV NNMGLRVRLY GCERLRKERL IGEAYVSFAT 360
  361 VDLELETNLW LPLEPRNTSS VLGSTSDLLS LARSESAGST SSMQHGGVSE LLLGLSYNGV 420
  421 TGRLSVEIIK GSQFRSLSLN KAPDTYVKMV MVSSIGQEIS RAKTSIRRGQ PNPLFKETFA 480
  481 FQVALFQLND VTLMISVYAK RHMKKNEMVG WFSLGLNSSG PEEVAHWADV CEMPKGEMLA 540
  541 RWHVLVDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle