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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54639134, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHGDSDDNNF TDDESSPLTH DIYGGSQRTI QETKGWDVFR DPPIKIETGS TANQECLELT  60
   61 IKILKIFAYI ITFIIVLTGG VIAKGTMLFM TSQVRKDKKM EYCNKDLGRD KSFVVRLPEE 120
  121 ERVAWIWALM IAYALPEIGA LIRSARICFF KTFKVPKTGH FLFVWLMESF NAMGTALLMF 180
  181 VVLPQIDAIQ GAMLTNCLCV IPGIFGLLSR TSKEGKRFVK AIIDLAAVAA QVTGLVIWPL 240
  241 LENRRELWVI PVACVMISCG WWENYVSPQS SLGLVRALGR IKEEMRYTRY FCHMFLSIWK 300
  301 ILLFFCLALL IYWAQGEEPG NLFAMYGDAF GPHKIIVYEL PAGLGGVLPD TLESANIDTV 360
  361 EVDAAYNTVV YVLLLQIFGA YLCYIFGKFA CKILIQGFSY AFPVSLTVPL AVTLLISACG 420
  421 IRIDDPCFFH DTIPDYLFFT SPSNFRFNNF VTEQMAWAWI LWLLSQTWIA LHIWTPKCER 480
  481 LATTEKLFVK PMYSSLLIDQ SMALNRRRDD QADVKTEDLS EIEKEKGDEY YETISVHTDR 540
  541 SSAPNKPSIK SSDNITRIYS CATMWHETRD EMIEFLKSIM RMDEDQCARR VAQKYLRVLD 600
  601 PDYYEFETHI FFDDAFEISD HSDDDIQCNR FVKLLISTMD EAASEIHQTT IRLRPPKKYP 660
  661 TPYGGRLVWT LPGKTKFITH LKDKDRIRHR KRWSQVMYMY YLLGHRLMEL PISVDRKDAI 720
  721 AENTYLLTLD GDIDFKPNAV TLLVDLMKKN KNLGAACGRI HPVGSGPMVW YQLFEYAIGH 780
  781 WLQKATEHMI GCVLCSPGCF SLFRGKALMD DNVMKKYTTR SDEARHYVQY DQGEDRWLCT 840
  841 LLLQRGYRVE YSAASDAYTH CPEGFNEFYN QRRRWVPSTI ANIMDLLADA KRTIKINDNI 900
  901 SLLYIFYQMM LMGGTILGPG TIFLMLVGAF VAAFRIDNWT SFHYNIVPIL AFMFVCFTCK 960
  961 SNIQLFVAQV LSTAYALIMM AVIVGTALQL GEDGIGSPSA IFLISMVGSF FIAACLHPQE1020
 1021 FWCITCGLIY LLSIPSMYLL LILYSIINLN VVSWGTREVV AKKTKKELEA EKKATEEAKK1080
 1081 RVKQKSMLSF LQSGIGDNGD EEGSVEFSLA GLFRCIFCTH GKTSDEKQQL TTIAESLDTI1140
 1141 KQRMDTIESA VDPHGHHASR HNRRRTTSSG SKDHHLLTSV AEKSGDESDV SDSDTSAEPK1200
 1201 QERDFLTNPY WIEDPDVRKG EVDFLSSTEI QFWKDLIDQY LYPIDNDPAE QARIAKDLKE1260
 1261 LRDSSVFAFF MINALFVLIV FLLQLNKDNI HVKWPFGVRT NITYDESTQE VHISKEYLQL1320
 1321 EPIGLVFVFF FALILVIQFT AMLFHRFGTI SHILASTELN FCKKKSEDLT QDQLIDKHAV1380
 1381 EIVKNLQRLQ GIDGDYDNDS GSGPDRIARR KTIQNLEKAR QPRRQIGTLD VAFKKRFLKL1440
 1441 TADAENNPAT PILTRRLTMR AETIRALEVR KNSVMAERRK SAMQTLGAKN EYGITTGAPV1500
 1501 NNNGGLPNQR SGRVSNAGIS IKDVFNVNGI PPEQIYGSNG GGTINQGYEH VIDEDGDGNS1560
 1561 LRLTTRNPHP HPQVSWGQNT SGGNATGRL

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