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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54639120, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTCDSELES HSGGIDLTSK KPRQSANVAT VCKGFLTTYQ EYCSHTSLHG VQYLGDYQRP  60
   61 MRERIFWLCA FLISIYGCAT LISSAYTKWT ETPVIVSFAE KSTPVWNIPF PAITVCSETK 120
  121 RVLKPKGKET SFADLYSQFN IEMRSSRVFK PQNITALEME EFRTLLHVCN TQLIDQAMPL 180
  181 ISGDDVDYFD VLERMLPQFD RYFFYCRWLS RFGECDKFFR KTLTEEGICY TFNGLSATDI 240
  241 YREDTYQYRY SAGALDMENI SSHSAWSLET GYDVESDVVT YPARVLSAGA RSGIFLALQS 300
  301 FKQEVDYACR GPVQGFKVLL HAPDDVPQVS KQFVRIPMGK EVLIAVKPSM ITTSSGIAEY 360
  361 HPLRRQCFLS HERALRFFKI YTESNCQLEC LANFTLTKCG CVKFSMPRNM DMPVCGEDKI 420
  421 YCYDRAERQL LVREFHRVKA LNAERDAPRG VETACNCMPA CTSLAYNTEI SQANFDLEEM 480
  481 LIAEGDTDFM KEYAGSQMSR LSIYFKQDQF ITSKRSELYG ITEFLANCGG IFGLFMGFSI 540
  541 LSLVEMIYHF TLRFCTNMKH LVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle