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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54639099|gb|E...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRFQISKV NGTSNAGYDG EPGAAAGDQT DSGHQENHLQ AKVPGENGEN RRSSRLSFRG  60
   61 FGHFLRKSDA ERKFSLAQLT KETLPRLDNY RISMRNLKRP SIGELQGELQ DQSITIPEPE 120
  121 PEPIGGHIKL GWIVGVLIPC LLNIWGVMLF LRLSWVVAES GILQSLIIIT ISAVVCIITT 180
  181 LSLSAISTNG EVKGGGVYFI ISRSLGPEFG ASVGVVFAFA NAVSASMNTI GFCESLNVLL 240
  241 KNNGLKIVDN GINDIRIVGA VTILVLILIC CVGMEWETKA QNFLIVTIVL AIFNFVIGAA 300
  301 IGPQGNEDLI SKGFVGFSWS TFKDNFGSEY RYAEGVNHDF FSVFAIFFPS VTGIQAGANI 360
  361 CGDLKEAGAA IPKGTFWALL ISMTSYALFV LFAGGAAVRD ASGFPADLVN GTLISSELPC 420
  421 LASGNCTWGL FNSYEMMQTM SVWGPLIYAG CFAATLSTAL TNLLSVPRLV QALGIDEIYP 480
  481 GLIYFSKPYG KHGEPYRGYV LTFFISAGFL CIGELNLIAP LISTFYLASY ALINFCTFHA 540
  541 AFVKPLGWRP TFKYYNAWLS LFGFAMCVAI MFLINYVAAI ITFGIIFALY LVVMYRKPEA 600
  601 NWGSTTQAQQ YKAALMAVHR LQNVSDHVKN YHPQVLVLSG DPKTRPPLVD FGYLLTKNNS 660
  661 LMFVANIIPV RVGYKNRQNL VKDGQKYLDA RKIKAFYNVI DGFSLEDGIN ALTKSTGFGK 720
  721 MSPNIVLVGY KPDWNRCRKE EVESYFAILY NAFSQRMGVA LLRLPNGLDF SELSSEVNLP 780
  781 PNGMGHMHTA NAQGFTNELM PAANAASELL HIDSNLNLAS MDSPNSSYTM PQPAPMPNMQ 840
  841 RSSRSYKVNN QEDAAVTYHT KGGSDIPQNL LDAMTIFTRK QAKGTIDVFW LYDDGGLTIL 900
  901 LPYIISMRSH WQNCKLRVFT MCHGKDEEQE EKSMASLLTK FRIKYSELIM LKGVSEQPRT 960
  961 DTLLKHQRLI EPFRRGARNE FGITDEELQS MSEKTNRQLR IHELVVKHSS NASLVVMSLP1020
 1021 MPRKEAISAP LYMSWLEMLT SDMKCPVALA RGNQTPVLTL YS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle