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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125776386, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLKCSVFV YLFLIFDAGH AFNIIGLNKQ MLYEYVGNVL VGAKPQDEGH PSPPTTGWIV  60
   61 RGKLTLQRQS ELVMAAALVI DDVTLNNSGE KFLQNKEMYP PYKPFKIVLT ENGSISHVVF 120
  121 KEGDPIWSMN FKRAIASVLQ FQMKSSGAFV LDELGIHGTC RTEYFVSNKT NYISIRKTPE 180
  181 LKTCTPYSEA VHITRSNVPP NTCEFDHQKS VIIGNEAIYG MLPHNETGYF LSMAHAKGTT 240
  241 LIHTFESTGE AQYINSELLL NFQNETPIDN PIDIETSMAA EPSSLELQPL EPNDPTGGRN 300
  301 PQQQETLIVQ AGGLLDSLAE ALESTEFKFS EPYDSTLSDV IKLLSEMDFE SLKKLYREVD 360
  361 IGTSYRQETI RNIFHEIIPR IGTKASVFLT HHLIVRKMTK PQIAVQLLIP MPFHIFELSA 420
  421 ELVHVCEDFL KIGPDRPDVR QAAILSFATL VHNVYVARGI DKDEFEEYVQ KYFNAYLNDR 480
  481 DFEQKMLYLQ GLNNLQLGNV ANYLEPIVQD PNENEDLKFM AAWTTLPLAP TRPERIYEIY 540
  541 WPIFESRNAS LELRVAAVTL LLISNPTAAR LISIHRIIQS ETDPHMINYY RTTVTSISET 600
  601 TYPCYQHLQV IPSRLTLSTN QFTSFCLLLR RRLLSYMHRH LPQKPEPRYW VTGNYIFDYR 660
  661 DSKFGIGAML QVFLVGDPKS DMPVVAFFKF DTEALGKFTG QLALYIKARG LPDAVLNAMQ 720
  721 SRNSSDPFTY KSIKTLLSML QAPAINSKNL HLEFILQMEG KTVLSYFLNQ RMFTQLTYEN 780
  781 LLERLQQIIR TDSHINMQTV RWPFMNRYSV PTVLGTASDV LLQTTVLTSL RGNITEQRTP 840
  841 PISKHTLEID ARYSSYASVR SRSYNPFLNL DHEINREQGF LIYIPFSNEL NLNTSGSPCT 900
  901 RYSFSRPQNL TSGLSFKSRA VTKTRGLITK TATAPFEEIM LPERSNDVFQ FLTYTIPDLG 960
  961 VQLAINTNLN ELIKYRGMLL KSEFIENGFS RNMIVSLLMY VFGFTQLSSI HLGHDRNFTL1020
 1021 LMYNENATKL EGSFCADDVL KTADLKGRQI ALTLQHTDET QNVDALHSWN ITLDVQTSTK1080
 1081 SSWFKVIGQI QRNSKDDEED WKACTKLTYE PLVFTKRPHT LNGNVVFGLA TEEGACPEHG1140
 1141 STVQFAARAG PSEHARAFLR SDKISLTDTD FCPKEVLKFS PIPTSKYCKR SNFENFTSIT1200
 1201 QYDMDLKFNN MPAWFELWSN RLDHLVSALS AHKVDSLHMS QEINITMHTP NDYFWLTVEV1260
 1261 NGVNWRIYHI PFLYKLDSKF DASHELTYDS GLKRSCSVIN GMINTFDDYL INLGEIITQP1320
 1321 ECLTLLVADC SPLPKMAVFL TPSPTHGLAS NYGLRIHIGR NYFNLHSRTD NSSQPNDEPV1380
 1381 FIYVNQDQTP HDVRQQPYQW PIEDSDYDFR VELNEQNILI VECSQISATI QFDLFNIFNF1440
 1441 EIYGVYKHQM CGLCSKPLNR MRNYTLCEPE MISSSTPLPA PLHENSTEKV VV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle