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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54638991, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLSLCLLLVV LLPSRGPARA WFYDVEAVGG VTPMGSSSDE HSFKTPETKN SHKSQITELV  60
   61 QHFPSIPAQA MPNHHHVAHR QLVFVALLPS VESDNKNDCI MPKVLPVLEL GIRHIQRKGF 120
  121 VGGTHFDIKL ISRDTFCSSK YGPIGFFEIY TQWPEVNAVF GLPCEYVLAP ISRYADVWQV 180
  181 PVLTTGGNAK EFNKKSESYS TLTRLKGAQV NNLGNVVRAI LNSFNWTRTA LIYQNENAKV 240
  241 KGNSVCFLCL AAIHDTIEKQ SVYQLGFDTT TWTKADITRM LKNVAMQTRI VIMCADPQSI 300
  301 RQIMLTAEEL NMIDSGEYVF INIELFSRVP YLTSQPWYDK NDTDLNNERA QKAYTAMLTV 360
  361 TPKQPNDNEY TRVSNEIKAI AADKYNYTFS DNEPISAFVT SFFDGVLLYA NALNDSIRED 420
  421 PSMLTRPING TDMVRRMWNR SFTGITGNVT IDANGDRLSA YSLLDMNPNT GRFEIVAHFL 480
  481 HNRLEFESNK EIHWAGDREE APSDHPSCGY DGALCPDNSL PGYAILSIVL GTMVIIMVVC 540
  541 FFFGYRHYIA EAEINSMSWK VSLEDVMFRD TAERGLRGSF HSLVKQSSQL TLMSEDMVSI 600
  601 NGDRQIFIPV GMFRKSKVAI KPIEVDNVQA LLTRNLMLQL KRMKDLQHDH LVKFYGACLD 660
  661 QRRSFLLTEY CPKGSLQDIL ENEQFQLDWM FKLSLMHDIV RGMQFLHSSD IRSHGNLKSS 720
  721 NCVVDSRFVL KITDFGLHTL RRSRYDLESD GGNCNSHAYW SNLLWTAPEL LRLEQQRAPE 780
  781 GTQKGDVYAF GVIVHEITTR QGPFFLGKCA YEKSPQEIIE LVKNYHPSRM PKPFRPDLEP 840
  841 FGDTKADING IIRRCWAEDP AERPDFNTLK SMIRKFNKDN ETGNIVDNLL KRMELYANNL 900
  901 EELVEERTQD YHEEKKKCEK LLYQLLPQSV AAQLISGQPV VAETFDQVTI YFSDIVGFTA 960
  961 ISAESTPMQV VQFLNDLYTC FDSIVENFDV YKVETIGDAY MVVSGLPIRN GNQHAREIAR1020
 1021 LALALLEAVH NFRIHHRPED RLKLRIGLHT GACVAGVVGL KMPRYCLFGD TVNTASRMES1080
 1081 NGEALKIHIS ETTKVALDEF GTFVTTRRGF VPMKGKGEML TYWLEGEVPR PDDHLSPSKL1140
 1141 MLSRRSSLKQ PQRQHSLHKQ YSELVVAAPP PLLAAAVPVI ALPPPKENSP NLRVKRKISS1200
 1201 SSPKLNGSSF DYQKTENNYY LDAEAAGQKA YDIYSSRSLR DMEEASDSWE LAHFRLPLSG1260
 1261 ALKNHNNNHG HVQSNSNSNL SGILQPLPAS GRSRLKPSPT ISTLLTSSRS DANASGLDTG1320
 1321 SLGSAQRIKF ADGDETSLLI GKQKGMQPQM QMQPPAAVAK PLVMGSSPQR SASSCSSQNI1380
 1381 PTANVGADAT HHYGYLVKNY KQLPQVAGRG AGAGSAVTQP LLAKINS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle