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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54638934, gi|...
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NALDSCLPNL KMCVRESKSF PSLWIIFLVL GLAQGLTEID PQDPEDPEDP FSSTDEARFD  60
   61 WPWSRNKTTK GTPAGLNLKN EYAQMEIASF SDFERHPCRR VCQQGQSQTC YYQLVVHNYQ 120
  121 RLGPECQRCQ YDERACAAEY CLYGDGVASP VMAVNRMIPG PPIELCENDT VVVDVLNYLG 180
  181 EATTMHWHGL NMRRSPEMDG APFVTQNPVQ PGEVYRYEFL ADRSGSLWYH SHMGWQRGFG 240
  241 VAGHLIIRQT RQANQHAHLY DYDLVEHALM VQDIFYDHEL TTVRNILING KGRNHLNQLP 300
  301 DNDNRHRYER LRVTPGYRYR MRVLLNGIAN CPVEFSIEQH KLLIISTDGN DIEPVLADGF 360
  361 FLTSAERFDF VLEASQVAKN YWIRVRGYEQ CEDLKLYQGA VLSYRGATRS ELPQGNILVS 420
  421 RQSRALDADN FLKPTNISGQ SRALSAAPVL VNDYRIMPTI AAGPAAFLRL ATAEKDNNVG 480
  481 TVALRSLQPV PWPRNTKFRT YYSSFSLRRA PNGEMLFQID EISYIPPGIS LLQGRHLFQD 540
  541 DGYFCNRSSL AAQGRNCQQD VCECLNVIRM PAYRPIEMVV ANYMVNTHPF HIHGSSFHLV 600
  601 GQGVVGNMED LRNIQKLDRQ GLLPRLPDHY NAVLKDSVQI PGLGYIIVRF ISNNPGFWLY 660
  661 HCHVEAHAVQ GMMAVLKIGE NHQIKRIPAR VRC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle