YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125776058, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIDFLILAL LLVSFLINLL ALCAFWITPG LRTTANRFTI NLLAINLIGC CILAPTLFLG  60
   61 GVRSLNEPQS GPAAESIEFY SKPGNHQVTI RRHGQVVEQD GIVVRRNISD GDTIETIFKC 120
  121 NATYCRELTI DERGDGGIVI TETETHEDNL SAFGSTASPL PTPAFVLPPV EMRCWSIDMT 180
  181 AALGALAVLL VVGDTWCAVT DPLRYHSRIS GVKTWVFIAL TWAVGILFGA LSALRVLDFE 240
  241 ADTLLSRQRR LAATFFNISS TNSIFGVVYA CVYFIVIILL PFGFVCGMYW RIFSEARGNG 300
  301 LRMRQNGSSP LLQSALNLTG AHQAAQANQY ANSLCVHRHS ISSASSHGGC SGGGGSSSVG 360
  361 GLQMQIDQRQ QRSSPSCLRR DSAAKVLLPT ISDDGGSDGD AESNAGIQLM PVPEQTLADR 420
  421 NQNILLTLQT ASGEIKRNYS ARQLPLLGTS SQDLRETNRL QGIRQVHSSP NLHKYTELRQ 480
  481 DSLSDECGSP HLLGHAQLQQ QQTISPRHQQ LQHQHQLHGS LGGPSGHALQ IPAIHASPKA 540
  541 LSYMSSLRHR LSNASSLFKY REESRAARIS ILVVIMFVVS YLPFGLLVLL QARLSAANFG 600
  601 GSSQLAIFMI LLANLSSPFI FAYRNKRVRR GVKRLFGLES SSSLQRHCSS SIKTNGTGGA 660
  661 GGIVSGSNAA QLQRNSSKLS QYSSNSCRYL TPQSSLVSQC QPAAVHTTLT LRPNSSCSTI 720
  721 INFGTTARGS AENMRPKLQR GITIVEHISL SPPTPRKYQA RRGRLFEMFF RGSKKLQSNC 780
  781 GMPTEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle