YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125776052, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRKLPKGF VLCGLNCLTF VYFPLVLPIL KCSGNAKASD DFDYRMQRVR NVLKEVPLID  60
   61 GHNDLPWNIR KFLKNQLKDF HFGGDLRELA PWSSSAWSHT DLRRLKEGMV SAQFWSAYAP 120
  121 CSSQHLDAVQ LTLEQIDLIR RLVQLYPHHM ALVTTATGIE QTHRTGKIAS LIGVEGGHAI 180
  181 GTSLSVLRMF YQLGARYLTL THTCNTPWAD CCKVDEPGKY PHIGGLSQFG KLVVKEMNRL 240
  241 GMIVDLSHVS VPTMLDALAA SRAPLIFSHS SAHAICNSSR NVPDHVLQRI AINGGLVMVA 300
  301 FYPHFVSCSG QATLHDVVAH INHIREVAGI DHVGIGAGYD GVNLVPKGLE DVSKYPHLFA 360
  361 ALLESDKWSE EDIAKLAGRN LIRVFKEVEA

Type	Start	End	Confidence
Signal Peptide	1	28	0.75
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	390	0.98