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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125775615, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRGRSVFCGM SGLELRISGR SVWAATLLLR FLLLASGVDG FGLNLMMVPN NDQSQGACIL  60
   61 ALLRKYFDSG DGLSGSVLCI SRNYQLHNVQ ELLLSGMNLY DGYPWTLLVT NPREGSPSSE 120
  121 FVMHEKPQCY FLIVENLEDE DLDEVFDYWK GMLNWNPLAQ FVVYLAAVEE TDEEMTDLMV 180
  181 ELLLTFMNKK IFNVNVIGQS EENEFYYGKS VFPYHPDNNC GNRVIAVELL DACDYPSDNR 240
  241 GDNDEDGDYE EEDDSESEND NENEEDVEIE ENGGEEATDI TGESQEGANE DVKDESREDE 300
  301 KQEDNKHSTD SDERHNVTTK VEATIEEFFR AKFEDKFPRD LSGCPLTAAF RPWEPYIFRS 360
  361 GEEPVEDYYY GTQGDDDYNE TTSYGDSGDE SYADVEAADT TGILEADGGA DGSKSQLSGI 420
  421 EYQMVQTIAE RLNVHIEMQA ENSNLYHLFQ QLIDGEIEMI VGGIDEDPSI SQFVSSSIPY 480
  481 HQDDLTWCVA RAKRKHGFFN FVANFNADTG FLLLLFIVTC SFMVLMAQRV TGFRLRNLNN 540
  541 YFAICLRMLG ILLTQAMPAQ TLSLVLRQLF ALSFLMGFFF SNTYQSFLIS TLTTPRSSHQ 600
  601 IQSLQEIYSH RMTIMGSSEN VRHLNKDGEI FKYIREKFQM CYNIVDCLND AANNEHIAVA 660
  661 VSRQHSFYNP RIQRDRLFCF DRRESLYVYL VTMLLPKKYH LLHQINPVIQ HIIESGHMQK 720
  721 WARDLDRRRM IHEEINRVRE DPFKALTLAQ FHGAFAFSSG LLLISFSVFL IELAFVKYYY 780
  781 R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle