YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MIRO_DROPS
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQYTVSTRK NVRILLVGDA GVGKTSLILS LVSEEYPEEV PPRAEEITIP ANVTPEQVPT  60
   61 SIVDFSSVEQ TEETLGLEIN KAHVVCIVYS VDDDDSLDRI TSHWLPLIRS KCNATLEGDA 120
  121 ETEAETEAAG EGLRKPIVLV GNKIDLIDYS TMDSVLAIME DFPEIESCVE CSAKTLHNIS 180
  181 EMFYYAQKAV LHPTSPLYIM EDQELTPACK KSLVRIFKIC DTDGDNLLND YELNLFQRRC 240
  241 FNTPLQPQIL DEVKAVIQKN VPDGIYNDAV TLKGFLFLHC LFIQRGRNET TWAVLRRFGY 300
  301 NDQLEMCQEY LRPPLKIPPG SSTELSHRGQ KFLISVFERY DRDCDGALSP EEHKMLFSVC 360
  361 PSSPWSYSTD IRKSCPINDK GWVTLHGWLC RWTLMTLIDV VKTMEYLAYL GFNVHENDSL 420
  421 LAAIHVTRER RIDLAKRQSS RSVYKCHVIG PNGSGKTGLC RGFLVDEMQK LIGKEFKTNV 480
  481 VHCINSVQVY GQEKHLILRD IDVRHALDPL QPQEVNCDVA CLVYDSSNPR SFEYVARIYI 540
  541 KYYAESKIPV MIVGTKCDMD ERRQDYLMQP AEFCAKYKLL PPHLFSLRTN KKELYTKLAT 600
  601 MAAFPHLRHF GLLTEDSKLL WKAGLGLAAA TMLGFIVLKT LSAAGSHSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle