YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195145014, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRL VTNQFCFEHR VNVCEHCMVQ SHPKCIVQSY LQWLRDSDYI SNCNLCGTSL  60
   61 EQGECVRLVC YHVFHWDCLN ARQAALPANT APRGHQCPGC SVEIFPNTNL VSPVADALKN 120
  121 YLAQVNWGRN GLGLALLSED QSSSLKAIKS KASVSQAAVS NMTKVHHIHS GGERERGKPN 180
  181 GGDASTPHSV LLMDAFNPPS SGDFNASSRR PLLPRQSPIG GTDRDDNKYQ RRTPAALLSR 240
  241 WTRRFYSPSS RPPWRRTWFL VLSGILAFVM FIYLLAWMGR SGSNDGLDES WNNPNPQPNH 300
  301 YE

Type	Start	End	Confidence
Cytoplasmic	1	256	0.75
Transmembrane Helix	257	277	0.95
Non-Cytoplasmic	278	302	0.73