YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54638374, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSLVLRGA VRCNAANLVK SARITPLKAY STIVANAQRQ TLKPLALTKM VAPVVREISV  60
   61 SAPRMASAES SHTAMWTLER LVSVGLLAII PAAFIAPSQI LDALLAISVV IHAHWGVEAM 120
  121 VVDYMRPSVV GNILPKVAHI ALIVLSVATL GGLFYFIQND VGLANGIKRF WAIKGKDAEE 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	80	0.94
Transmembrane Helix	81	115	0.75
Non-Cytoplasmic	116	136	0.46
Transmembrane Helix	137	158	0.92
Cytoplasmic	159	180	0.46