YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54638309, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSGSSELLL EQQQQELRLR KIRELAPKKK NGNRRFRSWR ERARFYGTST LAFFSVTAGA  60
   61 SLLFLVPLYV DPAISTLSHD FIENPTLCTT TRREDLVGIF NCSWSSCREG CTSDLYRCVH 120
  121 IYVTFIEQNI TIPENMTDFS NYTADWEQSG EATLLVNIKG CGYPPTVTCK TFNDYYGADG 180
  181 AIYPCYYSRK NKTVVLTSYS HDDQVAVIIN FFAVPFVITV ISSIALCIMH CDCRCKKDRS 240
  241 HRRNRPQCRR PRIENLSDTS ISTRVDMLTP AIEVYKPPL

Type	Start	End	Confidence
Cytoplasmic	1	44	0.98
Transmembrane Helix	45	66	0.95
Non-Cytoplasmic	67	207	0.98
Transmembrane Helix	208	231	0.84
Cytoplasmic	232	279	0.92