YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195145683, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKTWVKREN IYYKPFYRQK SKMFLLLIFL VGISFIAYQA FSLNQLPAVP TPWNLQQLRR  60
   61 KHKEMMQSLG SKQRDVDPFD GGGATEARAA AAAVLDGSSA PDVEPIKIIR GTRLFDYDAY 120
  121 KPNFEGKFKC LDGSKEIAFN RLNDDYCDCE GDGSDEPSTN ACANGRFYCR YQKRHITGRG 180
  181 RDKYVASSRV NDHVCDCCDG SDEWTTHAKC RNDCA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.92
Transmembrane Helix	21	41	0.89
Non-Cytoplasmic	42	215	0.99