YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54638094, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLFCFCRYRQ TRFSSRRVRK RVVFKHGECN VVQGNVAKRR RRYLQDIFTT LVDAQWRWTL  60
   61 LVFAASFVIS WAFFGFIWWI IAYAHNDLEY INLRDKQPDL VANMTHTVCV TEVKSIMTAF 120
  121 LYSVETQTTI GYGNRYVTEE CPEAIFTMCI QCITGVFIQA FMVGIVFAKL SRPKKRAQTL 180
  181 LFSRNAVICH RDGVPCLMFR VGDMRKSHII EAHIRAQIIR KKVTKEGEVL PFYQQELHIG 240
  241 ADGGEDRLMF IWPTTIVHKI DRNSPLYMLS ASDMLKERFE VVVMLEGVIE STGMTTQARS 300
  301 SYLPSEVLWG HRFVNVVSFR KETGEYEVDY TLFNNTYDVD TPLCSAKQLD ELKSEYSKSA 360
  361 KSCLGAAPFP DRALSASLFQ RIASAASVDH LDPASDESLD SGRLQIRSHS IPNGVLASEL 420
  421 EPLNNNKHGA SFTMGGLTIT TTAPSIPNLS SINEKTNSGN SINSSNYSNN NSLSTLAIGS 480
  481 GSGSGSGNGG APATSPSNGS IRKSNPRRLS IKQDQLPIDS IC

Type	Start	End	Confidence
Cytoplasmic	1	57	0.93
Transmembrane Helix	58	82	0.89
Non-Cytoplasmic	83	143	0.91
Transmembrane Helix	144	168	0.82
Cytoplasmic	169	522	0.80