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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54637991, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSTVLNFAQ RVAEISLLGG IEIASVALIV YYVFAKTRAP IIIANLFPNL NLSYRTSLGK  60
   61 INTIRSDLLV TLRSTNEPKV QSSVAHGIGT QNMLELTPHA GYKPFKGYFD WGVIFPYVAQ 120
  121 VFRSEKFEYR QVTEIVHNDP ALKLAIKQAA EQDLREQRYA QNGHRLLTRS VSGDHEEEDE 180
  181 SKGISYQAIL RKQEQRAISI LKEMGSTLNN GLLAFTSWIL YKLLPCFLSG VVTNTKQIEM 240
  241 LKTASERSPG TPLIFVPLHR SHLDYIMVTF ILTNNDIRSP LVAAGNNLQI PVFGGLLRGL 300
  301 GAFFIKRKID PVEGKKDVLY RAALHLYLTH ALKQGHNVEF FIEGGRTRTG KPCMPKGGIL 360
  361 SVIVNAFMDG SIPDALLVPV SVNYERLVDG NFVREQKGEK KIPESFTKAI SGIWKALNSK 420
  421 YGRMRIDFNE PYSIRELVNS FNQIANEDGS AKIYKPVVKT LQHNQSTSSL YGTDVVCEEH 480
  481 RNLIESISRQ VVFDCAAATS VMSTNALAFL LLTRYRQGAE EQLLAAALDD LRNSLSGCKD 540
  541 IGFAGESSHV LEYACELLGS GLVSRTRNEN GRMFIRAVDS VESVIELAYY SNALAPHFAL 600
  601 NSILMTTFHS LLPETPGSSN TAAAVSRKKL IEAALENCQI YRYEFILNKP TQVLENLLDN 660
  661 HLNDLLFRDY IRLTEEINSL DSYRARNLAQ HIDVDDDDDY LCVENNENDD EGAKLLFCSE 720
  721 TLQQQRNICE VLSPFACTYL TVAQALQILH RNSMLESEFI NFVINDLSAK VKRGSCIYAE 780
  781 SISTDSVRNC LKLLEKWSVI EVCNQQGMRL ISLNTLYEMS RDSLNTIVKK IDAIVPKLNA 840
  841 GYLQINP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle