YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125773969, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKEEMPSS GAAVVGGATA ATTPSAASST SYANVVQNLD TKKGGVPVAT AAAAAASSSA  60
   61 VDNKENQPNL KSLKSWSEET AAAEAAGETL VSNVSLALTG EKRAAAGGDN TAENSSELDD 120
  121 NNDFVPVLSH HRRDRKKARK DKPREQRIDR PQQQQQHPGS GAGQNQKPLQ PGRRPAGNGN 180
  181 GNGNGNGGAS DGATDRKATV RPRAPRGGSP RKSGAPGGVT GAAVVSGKVQ HKDRKSDTSP 240
  241 SASLEANSSG NEAKSGDGES QAAAGAAAGG AAAAAVAPPP KRFVAAPPPK VNAWKVS

Type	Start	End	Confidence
Signal Peptide	1	27	0.95
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	297	0.99