YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LMLN_DROPS
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLPPLQTQP GTFLVALGLC CWLLATANAH NCQHQHPKAH EVVHGVRIQL ADSDDDDAAG  60
   61 SSDAAVHSVR RRSVTAEQPL RILLVYDDSV YRLEEEKFNL INDTVLPEAV QFWEQALMVR 120
  121 ETKGIIRLNR KCDSTQVYVK NGHTHCIDQC KATTMCGEVQ VPNEHLDVCR VCNATGQNCR 180
  181 IDSNTQPGDG IQNADFVFYV SARQTQRCFK GLTVAYAAHC QQEAALDRPI AGHANLCPES 240
  241 ISTKPQELQT LISTVKHEIL HALGFSVSLY AFFRDDEGRP RTPRKSETGK PFLNEKLQIH 300
  301 QWSNETIRKV VRENWSVRGG HVNKEVDMMV TPRVVAEARA HFDCDKLEGA ELEDQGGEGT 360
  361 ALTHWEKRIL ENEAMTGTHT QSPVFSRITL ALMEDSGWYR ANYSMATPLS WGKGLGCSFA 420
  421 MRSCKDWIQM NHARGRSIHP FCSKVKQDPL QTECTDDRNS VALCNLIRHD YELPKSYQNF 480
  481 DSLQNVKSGE EGFYGGSVSL ADHCPYIQEF TWRSKNIIVR GSHCRFVENN PKPEKNFALE 540
  541 SYGHGSKCFD HSEAMWEERS CHQTREWQHW GSGCYKYTCF DGRLHILVGN YTYKCSFPGQ 600
  601 KLSIRIAANG WLHKGAIMCP PCHELCGSHF AAQGKQCRPG EEADPLNKYP RDNLACGAES 660
  661 RQQRSVAIIS AALLLAAGLR LGHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle