YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125773901, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTITYTGEVA TCRGFGCFLK LLLRWRGSIY KLVWLDLLAF LTIYYVINMV YRFALNPTQK  60
   61 ETFEAIVQYC DSYSDLIPLS FVLGFYVSIV MTRWWNQYTS IPWPDPIAVF VSSNVHGQDE 120
  121 RGRMMRRTIM RYACLCLTMV LANVSPRVKK RFPGLDNLVE AGLLNDNERT IIEAMNKSFP 180
  181 RPSKHWLPIV WAASIITRAR KEGRIRDDFA VKTIIDELNK FRGQCGLLIS YDTISVPLVY 240
  241 TQVVTLAVYS YFLTCCMGQQ WIDGKVVGNT SYLNKVDLYF PVFTTLQFFF YMGWLKVAES 300
  301 LINPFGEDDD DFEVNWMVDR NLQVSYLIVD EMHHDHPELL KDQYWDEVFP NELPYTIAAE 360
  361 RFRENHPEPS TAKIEVPKSA AMPSTMSSVR IDEMADDASG IHFSAGNGKM RLGSSPSLVS 420
  421 VSGTLSRVNT VASALKRFLS RDDSRPGSAT PSDDQKPYKF PASASSASLT AGNVGSATSA 480
  481 GKPAGSLRIT QQVIEEVDEQ ATITSMRANE PRPNVMNIFG PGTAGGVAAA MQPPPPAHSQ 540
  541 PVDIPARPLE YNRAHSQYEP SLFPPGGVDA LLSTSAPAGG SPSLLSNAAT APSSPVGDSS 600
  601 KSLYDPQKAT SRETVENMDL KSSSDMLAGS AAAEPEDEGD DFEKLKAARE KEKLVRQQKN 660
  661 LARTISTAPG VDAAAVAQAQ VQAQAMAAQA NAVLTAVASS ADLLAGAELV PSSTMKSDNA 720
  721 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle