YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125773787, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPIQVPPLW SSLTLEPRRP TPVAVANRAR CNLFGTDRDE VSASINKSLA NVTEKGLCRV  60
   61 RARYGVDILA EEELEQLNRL YRLPSKCQTM PFEPSPAGVA LTPSQIATTA KVITNCAERK 120
  121 DLMIRSCGQK PYGRLPQGIK GEIRRIFRMS STNWQHLIFV SLFVRLRFLL IFYFFPPFAR 180
  181 QSTNPQSV

Type	Start	End	Confidence
Cytoplasmic	1	153	0.92
Transmembrane Helix	154	175	0.91
Non-Cytoplasmic	176	188	0.89