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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125773393, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYECRNAQG EELGQRGIKL QRKCKKCRQI PGICHHILYQ SQDTNAPNGI CNIRAHHNIY  60
   61 SSICSSTRFR FSFIIITTTT TTSLLLIGIG IIRIRILRPG GQLKTKNGQK YVFNGPPTGV 120
  121 YVSRACLIIS AFIMIVALLF SIAITYFVAR QGVSPPTEAS PGCITAHHPE VNATPIETAG 180
  181 WLSLNAPPKP PPVVETETKM APAPPVGDII PVPKPPTEVL DNSTKPTDRP LKLYEGWRPL 240
  241 HYSLLIEPNI VTSSNNGSLT IEIERDVSKV SAWQPIVLDV HNVSIANVRV IRAPLPGKTS 300
  301 NGSDELELDF DSDYGEDNAT FVVRLDKSLA AETKLRLLLS LDFVSQVTET LQGVYKTSYT 360
  361 NPDTKKPEWM ISTQFSPIDA RRAFPCFDRP DMKANFSISI IRNSQYKMAL SNMPKSHSSA 420
  421 YRPGFIRDDF LTTPKMPTYL VAFIVSNMVD SRYAALDSSV VPRVEIWTRP TFVDMTHYAY 480
  481 KMVRKFLPYY EEYFGIKNKL PKIDLVSVPD FGFAAMENWG LITFRDSALL VPEDLELASS 540
  541 SEHMQYVAQI IAHELAHQWF GNLVTPKWWD DLWLKEGFAC YMSYKALNHA HPEFQIMDTF 600
  601 TMMEFKESMQ HDADNTSHAI SFDVKSTNDV RRIFDPISYS KGTILLRMLN SIVGDEAFRT 660
  661 ATQDLLKTFA YENMDRNDLW AILTRHGHEK GTLPKELNVK QIMDSWITQP GYPVVNVERR 720
  721 GADLVLRQER YLLPARNPAD HSRWFIPITF ETDELHKGDN IPTHWMTNQE DQQELIVSHV 780
  781 FNSASNNDSV VYLNLNRQGY YRVNYDMISW LALKKNFSTL PRITRAQLLD DALHLSQAEY 840
  841 LPYDIPLTFL MELYTSVDDE LLWSAAKPGL NYLIYNLKRE PAYETFRAFM KFIVRPAFDQ 900
  901 YGLNEPDNES HLQLKHRALV ANFACKFNYD RCTQVAQSKF REWMRNTKKN PIKPNLKSVI 960
  961 YCTALAEGSY PEWYFAYKQY KTTTSASEKE EILTSLGCTT KPWLLSKYLN MTINPTSGIM1020
 1021 KQDGALAFRA VASNAIGYEI AFDFLQSNIK EIAEYYGDGF STLSEMIKSL TIYMNKEYHK1080
 1081 QQLQDLAVNC RKLGLRAVET AINLAMEQVN DNIYWRTHSY HSLKNFLEGI VSEFQINIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle