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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54637610|gb|E...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSNPASDHV YLNDGFKCST ISIHTNLSEQ NGGSNNSVGS QGSKEFILTE DGKKVKPSRS  60
   61 TVECTKSWLQ ECSRRTFNRK TLHKKLPILG WLPRYSSQDA VGDLVAGITV GLTVIPQALA 120
  121 YAGIAGLPVA YGLYASFLGC FVYIFLGSCK DVPMGPSAIV ALLTFQVAQG SWQKSVLLCL 180
  181 LSGIVELLMG LFGLGFLIDF VSGPVSSGFT SAVSLIILTS QIQSVLGITA KGNTFVEIWT 240
  241 QVFHNIEHTR AGDTVLGLTC IVVLLLMRSL SSCRIGPDDE EQCSSLQRVV NKVLWIVGTA 300
  301 RNAILVVVCC LMGYLLHSEE HGAPFRVVGD IPPGLPSVQW PPTSLSANET SHGAAENFVE 360
  361 MVHSMGSGLI VIPLISLMEN IAICKAFANG KSVDASQELI AIGTANIFNS FVQGFPGTGA 420
  421 LSRGAVNNAS GVRTPLSNIY SGGLVMIALL FLTPYFYFIP RPTLAAIIIA AVVFMIEVKV 480
  481 VKPMWRSKKS DLVPGVGTFV ACLVLPLEWG ILIGVGLNVI FILYHAARPK LSTELLTTQS 540
  541 GMDYMMITPD RCLIFPSVDY VRNLVNKQSM RQNVPVVIDA SHVYGADFTT ATVIDSLISD 600
  601 FNQRGQLLFF YNLKPSICAI FEQVSAAQFV VYYQEQQLDD LLKERNYTQK RSETA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle