YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54637466, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPISHVVKS SLPNYLSSLP IPDSFGGWFK LSFKDWLALI PPTVVVAGLG YTTYLAFCPA  60
   61 ARCAGKDSGR CNSSIRKNEA KVVTMVDVED IAGQAAFCRC WKTKNWPYCD GSHGEHNKQT 120
  121 GDNVGPVVVK K

Type	Start	End	Confidence
Non-Cytoplasmic	1	36	0.80
Transmembrane Helix	37	58	0.62
Cytoplasmic	59	131	0.58