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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54637301, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFKLFVVCA LACGFMAYVL ANENISTELE DEVLNAVPVS VPAAAAKKVP QKDAEFVEIL  60
   61 KEQPKKVDPP AAKPNPKPKP PATVATTKAP LGAGQVGQRM IPVLSSRGTD DILTVAGLKP 120
  121 QPMSGALVMP SDYLGELYDV DSSGYNWDPN NNVAPPSTAS TAAGGYTITT ARLAELRNTF 180
  181 MYWYFDKDMY GGRADYQFDI HASMTQLHKN LNFQLPFYGF RFNYTRLSLN GYLEFSDPPE 240
  241 YLTYPLVFPI KDWPTKRDPS FIGIFFSKCR VGRIYPSDID QRTPGVYFRV ERDLMGRTDR 300
  301 FGVEVRERTM WDIRQGVVGA DTFVPKHVVI STWKNVSFAG GIDNSLFTTN TFQMILATDE 360
  361 VYTYIIWNYA VLNWLSHTEA GGDTTKGEGG TPAYVGFNAG NGTQAYEYKP YSQNMVIRDL 420
  421 ANRGWANGFP GRHIFRVDEQ ILIGSCNKDI DAALLPLTFA PESGNMLGGQ VVNITGPCFD 480
  481 PLIRVTCHFD TESVLGTYVD RNRVICVQPY LKAEGYIRFQ ISVGTQRFKW RGKYFVETPA 540
  541 AATEKIFFAT DDVHKKNPNE IRITWNAFNL TSNANANVMI SLWGYRETKI EPQLEYIDVI 600
  601 EASYTNTGSY VITPSNYINR NNKNRDMQFG FLQINLTQPE QYSGLALSPI LWSRPIPLAW 660
  661 YMGPQWERQH GLRWPRALCD NWIRADRFLR NFAADLPLCP CTLDQAVLDK GRFRPDRECD 720
  721 KDSNPSCLRQ RGAIHCVVSG TPVAQGAEQQ CCYDRYGFLM LTYDQMWGSR PRRVHNLGKM 780
  781 PWNEASKVPS LSMWFHDMRP FYSCCFWQEE QAVGCETYRF ERRPSQDCVA YQAPGIAGVF 840
  841 GDPHFVTFDG SAYTFNGLGE FVLSRSTDES NRFEVQGRFQ QLPDNYYGSV QATQLTAVAM 900
  901 RGNTTTTIEV RLRPLHARWR YRLDVLADGR KVYFDRESLK FQHFDGVTVY TPTYLLNQSQ 960
  961 VVVQFDAGIG VEVVENEGFM TGRVFLPWKF INKTAGLFGN WSFNPLDDFM LPNGQVASLN1020
 1021 LNDLRSIHTN FGLKWMLTDR EVPGVGAALF TREFGRMSSY YANATFQPNY VVDPADFLPA1080
 1081 NRTYDLERAE ELCGECYQCQ YDYAMTLNRD LAHFTKNYYD SIVNMQAENS KPVVSCGVLQ1140
 1141 TPRFGRKLSF DFMPGAKVSF ECNEGFILVG DQRRECLSNG LWNVPEYGYT ECLREVYYTR1200
 1201 RVAFIAIGII FLVICPLMLC IVCGVYRYRQ KQLKEDPQWQ MPMLPRSRAS SARNLRTLNY1260
 1261 DDDSDTDAST LKKTKKWDLD ENDEDVTSSE GEKPKQTGRR SLRASGTDLD QHGGNGSPVD1320
 1321 GPDHHEDDDD FDEADVHTGT IHPAGYHQPL SPEEADRLHQ QQYSPTFSGL DSRTSAASSI1380
 1381 NYTPQSAAQN RFGGVPVLPS STQYYSRPPS AVPVTANATP LRAAPTLPGG QPLTQDSGLP1440
 1441 SPPLATSPTP SVQKSTEV

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