YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125772503, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVSTVSRIA PVARSALLAN SKQYLRPLSS AVISQSQTLA AQNTTPVALL PQIRSFQTSP  60
   61 VTRDIDSAAK FIGAGAATVG VAGSGAGIGT VFGSLIIGYA RNPSLKQQLF SYAILGFALS 120
  121 EAMGLFCLMM AFLLLFAF

Type	Start	End	Confidence
Cytoplasmic	1	71	0.72
Transmembrane Helix	72	97	0.83
Non-Cytoplasmic	98	111	0.62
Transmembrane Helix	112	136	0.90
Cytoplasmic	137	138	0.61