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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125812032, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAFDLSNS GGAYQPLDSG SGKDASAAVP QRHAMSMRVS WIRQWRRYKL PALVLMMMFL  60
   61 MSCLAYRIMG AEQDAPPTDL HRSSPLLDAY EDFSAMRAGD LKMRIEEMVR IKSTVSVELR 120
  121 ELESRRQKLQ SDISQYNQKI EELKQELLRE QTELERLKMS VEQAQVAQRE AVQRNTPDLA 180
  181 LPRTLLPNSL PQKMNTVSTG VAASCAMHNC FDHSRCSLTS GFPVYLYDPD EHNVQRTGYD 240
  241 IDGFLKTTLK QTLGYNAHIV RDPTQACIYL VLVGEALLEQ DLLRNNRYAA QEAEQQQPTA 300
  301 PSQTHDCPIE MQKLYNLPYW GGDGRNHVLL NLARRDLCSR RTNALLQQNT MRAIVVQSAF 360
  361 ELDQFRPGYD LIVPPILGPP GGDVWQECAS MVPARRKYLL SFQGEMRPKT DPQGSNPLDD 420
  421 FILEHLTDMS KGPTQDQFEL QFQCVPATEQ QEVDSVSDWT LCGSDSSRKQ LLKDSTFALI 480
  481 LPPLNGRVAS TLMLARLYEA LRSGAVPVIL GADELRLPYA ETLDWRRAAL LMPKARITEL 540
  541 HFLLRAVQDA DLLLLRRQGR LIWERYLSSV QATVDTVIAS LRDRLGIPPR PVPPVVAQSV 600
  601 FNSTFIPLKS DPPVGLDTEP EESLGPIEPP YPSPAFRRNY TILRMQSKEA WNDWVDPFYM 660
  661 YPQLPFDPAL PSDAKFIGSH TGFRPIGKGI GGAGKEFSEA LGGNYPREQF TIVILTYERE 720
  721 QVLMDSLGRL YGLPYLHKVV VVWNSPKPPL DDLRWPDIGV PVAVLRAPRN SLNNRFLPFD 780
  781 VIETEAVLSV DDDAHLRHDE ILFGFRVWRE HRDRVVGFPG RYHAWDVSSN NMWHYNSNYS 840
  841 CELSMVLTGA AFLHKYYMYL YTYHLPQAIR DKVDEYMNCE DIAMNFLVSH ITRRPPVKVT 900
  901 SRWTFRCPGC PVSLSEDDTH FQERHKCINF FSQVFGYTPL LNTQYRADSI LFKTRIPHDK 960
  961 QKCFKYI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle