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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54637242, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLLAVTVA LALALALAAA AASASSLNNS FSSKRENVVK GALINTLNEN AREIEFEVKQ  60
   61 KGLEVVGLCE QTSALCTTLE AVFLHGLKDS FLWATFNVIA GDVERRPDPS FWSPCMVFMH 120
  121 KQVIEQIQGL SQITSEIGQC RAWVRQSLNE SVFSSYLNVM RKNSSAMSHY YKRHALAKDA 180
  181 DGLETASKIM ESLEAYVQFD LPVNSSLLNH WPDYSLQLSD LWTPALKSCP ISSGVDIASS 240
  241 LGSDIVTIPT PQPLQTNELF SESISNSPFS RSGNFGVPDL SQRENLELLI QKFDEMDIIN 300
  301 EEQSPPVATA ETSEAGEPVA PSGSNQRSRK RFKRHIEESF ADLADEELTS LPHGSNSLSN 360
  361 LMQTSWSGDL DLSPTATEPS ASRLFQRSVS MSSSSSLRSP TTDRCSYNAL LRKHENNRES 420
  421 GAGWSEIWEK FRASASTLNV AHAQRESEPP VSDDLSDLQS LDTNSEFELL ASDFDMAELQ 480
  481 QMVAQLCQLA REPGLDAQGF LCKSCQHPLG IGYTNFQVCA FSGNYYCNSC MDVESQLIPA 540
  541 RIIYNWDFRK YSVSKRAATF LAEFRSQPFL DMQLLNPSIY FASDAMAELQ SLRIRLNFIR 600
  601 AYLYTCAPTS IELLQNFFCG REYLYEHIHQ YSIADLGLIQ RGALCQQLQK AFKMGEAHVL 660
  661 KCRLCQLKGF ICEICQSPRV LYPFHISTTF RCLACGAVFH AECLNEQQPC PKCERRRKRE 720
  721 DQGLQEAVQT LKEKHETA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle