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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54637226, gi|...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHAVVKKPE TDTCNSSLKQ SLHPAQSHDA KLLNGSLTSH QLQPRTNGLT HAAASSAASV  60
   61 ASSGGSGLSP AAAMAGLLSG AGASTALPLP SNSNGEQSPS YERYRADDSS YVPVGQFFAG 120
  121 RSVFITGGTG FMGKVLVEKL LRSCPDIRNI YLLIRPKRGQ EVSARLTELL NAPLFESLRR 180
  181 EKPKELSKVI PISGDITSEE LGISEKDQNL LCRNVSIVFH SAATVKFDEK LKLSVTINML 240
  241 GTKRLVELCH RMMSLDALIH VSTAYCNCDR TDVEEVIYER PYNPDDIISL INWLPEDILD 300
  301 QLTPRLIGKR PNTYTFTKAL AEHMLLKEAG NLPVAIVRPS IVTASLNEPF AGWVDNFNGP 360
  361 TGLVSALAKG MFRTMMCEKN YVADMVPVDI VINLMIAAAW RTATHKSNDL RIYNCCTGQR 420
  421 NPLIWSEFVK YAMCSVRKHP LEGCLWYPTG ELRMNRPMNT LNCIVKHFLP AYIVDGVARL 480
  481 MGKKPFVVNV QNKIAKAVEC LEYFATRQWR FKDDNVHGLL HTLSPKDREI FVFDVRHIHW 540
  541 DKYVERYVLG FREFLFKQRP ESLPDSRKRM VRLYYLHQLT KLVAVLLTWR FLMSRSKRLN 600
  601 DMWSAFLDNA LKMARLIPFL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle