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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125811145, gi...
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WSALAMTMSL LVMATWLAPS QSLPQGAPET VCDTMLPFHS GGSVLPQNSV SPFSVETSAS  60
   61 TVGQGQTVRV DVTGVPEGLT FGGFMVQARN RNPPHQIVGQ FSPARDGTVK LMNCENSVNN 120
  121 SATHSNAGPK PQVYLEWQSP VDFLGQVVFN ATIAQSYSEF WVGVPSNPVQ IVRRDLGAVP 180
  181 LPTAVPQPAF GAALPTTRAP YVPPNYVAPS AVAAATADPF YNGCGVSKNC FGFPDGCVNS 240
  241 KTCTSMAAVT VRGDIYEFEL QSGRGNNAAY VAVGLSEDAK MGEDLTTECV PENGRVVMYS 300
  301 SLTSATPYAA VRTSVPQSSA RLLNASIVDG VIYCKVERDP VTVVQGRTFD LRRKQYHLLV 360
  361 ASGSSLKDNS VGYHDIGRLP SGKAINLAEV QDLSGSSKIL VQLHGAFMIV AWIGTTSLGI 420
  421 IFARYFKQTW VGSQSCGKDQ WFAWHRLLMV TTWSLTIAAY ILIWVELKRA VWHAHSIIGL 480
  481 ITVILCFLQP IGALFRPGPN DKKRPYFNWG HWLGGNIAHI LGIVTIFFSV KLPKAELPEW 540
  541 MDWILVSFVV VHVLVHLIFS ITGLASERHL SQRANTFQMG EMSPHHQQHA MRNGMTMERK 600
  601 MDAPYGAMRK GLLGVYGVVL VLFVVVLILL VVLAPIEQFL GKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle