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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125811089, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDTTLGYLI GLVMQLFWLL VSQGFCQMVQ HPLLASVLCL VLGLAQQTGQ KTLRERFRWV  60
   61 LQYPKIWITH SDLATDDCNS WYDMADQREG GLEGLDGAGF QSPINIDDRQ LSPMAIRELL 120
  121 NWNHYDELPA SIQVENTGHT LILRAQFHGN TPTISGADLL ASYTFVEVRF HWGWCNSEGS 180
  181 EHTFNHRKFP MEMQVMHRAS SGMSRSCTSS YDLLTIAYMF ELSAHNPFLD PLVQNLRQVQ 240
  241 QPGKAVNISP FPLCYLMPAF RAGFYSYGGS LTRPPFYEGT EWFIFPETLA ISDFQLRHFR 300
  301 QLLSHDGITP ITRNSRPVQA LGNRSINLNC FCPMNTNKLA SVPVVGLCQQ QQQAADVQKE 360
  361 EPVEKVQEQQ RGPAPAGSEE EGELIESMDT TTVITSDSTN MSLTTFLRKE QLTPTQQDYS 420
  421 STAIVIHSDS TSSDMCAPHP VGGPGSAQQA SCNADAICGV GDGINIPVYH GQIDCAAAKC 480
  481 CQISDERRFM LWGPQRSARV IVKPGKRTAP SQCSRLRLSR SRTLSRLIRG PYRSVAGAGG 540
  541 TETDRRARVN RQGPLIRGRV EMFLSAWLRV IIDFFLLFSL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle