YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54636867, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKFGAPRGK RPRVQVSMEQ KEQAIARILN GETKAGISRE LGVPESTVRG WVKRSEQRSA  60
   61 REAKDKQSKY MPKSQVFLSS RNSSEKFRHA DLDKKPSPLQ VLKLPQKRNF NGHSLAADRK 120
  121 YMRDTLSMPM QTPSVMPISY TLPTMAPVPC PISVPLPLLP PVPLSVPQTA VGGLNQTDDS 180
  181 QMIYWLHIFN AGVLNFTWIV TAAVQHARAH GYAERLTLWQ IINIYVEEAA RNVAANAGIF 240
  241 VNPLPKT

Type	Start	End	Confidence
Cytoplasmic	1	137	0.66
Transmembrane Helix	138	156	0.55
Non-Cytoplasmic	157	182	0.86
Transmembrane Helix	183	204	0.70
Cytoplasmic	205	247	0.70