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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54636784, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWSWAWPWW RLCLSLISML IWHAPSAHLQ PAENINYNLV HSWADKLGME LFHLGDFITR  60
   61 RKEVQESFKD AKVVQRVGAS IVDSMAKEIE MMMDLKVSAV RRIMDTAENT ALSHQNDMAD 120
  121 KMFSYYNAKE MLEPGDPVPP IPTPAPDMDK DIGEPLIYVQ PKVVVLEPRP EFHNTPVNFS 180
  181 VSSVHVPVNV FDRAPDVIKA IQWSENLDQI FRDNYKNDPT LSWQFFGSST GFMRQFPASK 240
  241 WKKDVPVDLY DCRLRSWYME AATSPKDIVI LMDGSGSMLG QRLDIAKHVV NTILDTLGTN 300
  301 DFVNIFTFDK EVSPVVGCFE DTLIQATLGN IRELKEGIEN FGPKSIANYT AALTRAFEIL 360
  361 EEAKSTSRGA QCNQAIMIIG DGAPENNREV FELHNWRDPP YKPVRVFTYL IGKEVANWDD 420
  421 IRWMACENQG YYVHLSDTAE VREMVLNYIP VMARPLVLGR HDHPVIWTQV YADIEDTKLS 480
  481 DHLWEIKQCE EQKADVLEYW QVHDRMLEPS EMHRREYRRI KETWNQPVDS NVYQFMTTVS 540
  541 MPIYDRRENA TRIANILGVA GTDVPINEIK KLLSPFMLGV NGYAFIVTNN GYVLFHPDFR 600
  601 PIFQGYILKP AYNSVDMIEV ELLDDDRPAR DFNPVLMTIR DSIINQSTGS KWMLVKNHFD 660
  661 EMKRVTRIKR QYYWTAIKNT PFTLVISYPE QYGVSRIDIR SEQDIHRVNI KGTNIRSFFD 720
  721 GKRWKIHPDW LFCKHSNRTF RTPETELLYF LERMTEPGWR WPASRSAMPP EHTAAMFCDR 780
  781 QLMQALVFDA GVTEWFSKNS SFNSKEDKRN EFKQRFGVTV AFLATHSGLT RWHEFNLAEE 840
  841 PSVGETFSQK NKRAIDEIWY KRAVDQHFVR AESFVYSVPF DAGESNSEIL VTASHAIFHN 900
  901 EGGKSAPAAV VGFQFQHSAL YKLFHNITGN ACAVDDKDCY ILDNNGYVII STRVHETGRF 960
  961 FGEVNGAIMK RLLEENVYKR VFVYDYQAVC FESRGDNNAS SMLLSPLYHV LRLSKWLLHT1020
 1021 ALWYIVQLMQ LAPGVSAHYA EMYSDMNGTE PEPEHHHNGH GKKSETEEHW LRYLTLHRTR1080
 1081 LKSCDMQREL YTLYNEKDNV VYNMTAHACE RPFVVLPIPF SNLILLVVDQ LCPRDAALVL1140
 1141 TVNPQTIDYH LSVNDSLACY KHAREFNRVR PQSCISRHAN ESNIKLCGKA CSLYANLALL1200
 1201 LLCHILSRWL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle