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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54636695, gi|...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIEDDAQMD SFWVQSAIGA IKAIAFVYDI ITLPVYLVLQ KPWQRRQDSR RVKAKIIKKD  60
   61 ESELTYRTTD PPRDVHVKML QENIDTLEKV FNYVAKTHSN KRCLGTRQIL SEEDEVQPNG 120
  121 RVFKKYNMGD YKWRTFTEAE RQAANFGRGL RELGQKPREN IVIFAETRAE WMVAAHGCFK 180
  181 QAMPIVTVYA TLGDDGVAHC ISETEVTTVI TSHDLLPKFK TLLAQCPNVD TIIYMEDQLH 240
  241 KTETTGFKEG VKVLPFNQVV KIGQDSKFES VPPKGDDIAI IMYTSGSTGT PKGVLLSHKN 300
  301 CIATMKGFVD MVPIYPDDVL IGFLPLAHVF ELVAESLCLM TGVSIGYSTP LTLIDTSSKI 360
  361 RRGCKGDASV LKPTCMTSVP LILDRISKGI NDKVNSGSAF RKALFKFLYQ YKVKWIQRGY 420
  421 KTPLIDKLVF KKVAKLMGGK VRIIMSGGAP LSADTHEQIK TCLCVDLIQG YGLTETTSGA 480
  481 TVMHERDMTY GRTGGPLTVC DIRLVNWEEG NYRVTNKPYP QGEVLIGGDC VSQGYYKLPS 540
  541 KTNEDFFEED GKRWFKTGDI GEVQTDGVLK IIGKSRVYRK KDLVKLQAGE YVSLGKVESE 600
  601 LKTCGIVENI CVYGDPTKQF TVALVVPNQK HLEDLAERHG LQNKTYEELC SSPVMEKAIL 660
  661 KEIADHSRKC KLQKFEVPAA ITLCKEVWSP DMGLVTAAFK LKRKDIQDRY QHDINRMYAS 720
  721 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle