YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194118062, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWKKQLGTL ALPYYWVNIL MALSYLLAKK TTFICTRIFN LGEEDDVCDL DSREAEILFF  60
   61 LLIVVMIRSR KTGSVTMINY LSSSFLYTKV ANAILWGYAD FRFGLGFLLM CVLVGMVLPE 120
  121 PSYRGPEHIT YFRNSQVFEE ELVRDKRTSW LICFYTVWNP SCVHFAPVFA ELSHEYNAEY 180
  181 LRFGKIDIGR FPDVAQKYRI SDSSFSRQLP TVVLFQQGKE VDRRPCVDNK GKLQKFFFSS 240
  241 DNVRATFGLN QLYKQAMERL PESAKKTTSP VESKKSQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.46
Transmembrane Helix	10	28	0.69
Cytoplasmic	29	75	0.67
Transmembrane Helix	76	91	0.51
Non-Cytoplasmic	92	100	0.46
Transmembrane Helix	101	119	0.84
Cytoplasmic	120	277	0.59