YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125810174, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHQNYNWDDP DPDNVEDIFA RPAYDDDEFV NLVPLGHRPN GHARLARYEN TLEVNVQEGD  60
   61 TLQALALKFH CSVADIKRLN MIDRDNEIHA HRIIRIPVTV HNVLLGNGVQ DALPAVHRSG 120
  121 NNSPRHNIER EPAIERNPLE DARQMLDERL LVAAVNASGS VDDDQPSTSK AASKYYEGAH 180
  181 GSPNDEANME RSPDDSAPLL NDLLVDRHAP LVRPIPGPSL RAIDWSGSDC DMSWICLLIF 240
  241 ILALCVVIPL VYVVYLAEHP HHNHSSQ

Type	Start	End	Confidence
Cytoplasmic	1	233	0.88
Transmembrane Helix	234	256	0.92
Non-Cytoplasmic	257	267	0.86