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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54636555|gb|E...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNAGTGDEE QCALLADSSV SSGSTASVSD EETAARQPKI KLRGTMKLQR RTRLPLPRIL  60
   61 RRFGCYTLMA LFIFLLLLVY LPLMYMDGHK RRVGLPDWTL ETSRSIGDYI DPVQETALIV 120
  121 PREFCRNKTF LIIAVCTSLG NFNQRQTIRE TWGNTSEFNY GAFVKLHGHL KGNYLPPMTA 180
  181 RLKHYAEYLS GEGDSLSASV RIVFIVGRSK YESLVGNETL SRVHSEAEQY NDIIQESFVD 240
  241 SYNNLTLKSV MALKHISRSC ANSTAYFLKC DDDTFVNVPN LLHFLLGGSV PLYNDTLDYH 300
  301 DRYTFLVKSP QNRLNDTSGV MYGHQFCNVV PVNDVSSKWY MPSYMYPPES YPKYLSGAGY 360
  361 LLSIDVVQRL YEASLNTTLV YLEDVYITGL CAQRAHITRH HHPLFSFAHS KHLCAFKGSI 420
  421 TQHQVKDDTM VEAWNYVSDY KIRCPPPGRY FNHMRLHKRP NC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle