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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54636492, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.76
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVTYLFVLI WLAFLICSGV LLFSRGFLLA RVSKTETSTC RRLSTNPNDE YVLTPEVVNE  60
   61 IFKDVNASSN LCLPQKSKVI ILVVDALKYE FGLYKSNITE PLPYENKLSV LQQLLERSPD 120
  121 QSRLMRFKAD PPTTTLQRLK GLTTGSLPTF IDIGSNFASP EINEDNVIDQ IVKSDLPLVF 180
  181 LGDSTWTDLY PRRFKRAYSY PSFDIFDLDS VDNQIMKHLP KELVSDDWQV LIAHFLGVDH 240
  241 CGHKHGPLHE EMARKLTEIN EIIASVVNGM DNDTTLLVMG DHGMTASGDH GGDTDDETNA 300
  301 LLFAYSKQNK FFGSDSGSDS ETLQQIDLVP TLAAILGVPI PYSNLGLINF NIVPDVAVPH 360
  361 LSKFQTLLLH AWQNAQQIYR YFFKYAMENK RTFDVQEMDK LETEFILLTH RVQTIYNGVA 420
  421 YKSFVRDLNT NLRDVLSTCR EIWVKFEPTQ MSQGLLFCFL PIFFAFLLIN NSRPADYPKM 480
  481 FQPKGISYTY LLNLAAGVFG YRYYKNFSFK TEEHGVIFFT AITSTVILSF YTLKHWTNIA 540
  541 SNWANIRRFG HMPTRLLLFS IMAVFFSNSF VIQEAKILSY LLVAVILLLS YELLLLSARF 600
  601 DFRNKFKASQ FLRSTALRLI LASILAICFI RFAYTLFRCR EEQGNCTDFA TSNTPGFSIK 660
  661 KPGTGKTYIL AVVIIVVYTT LTRLYLRSCG NLTGSSPNVL LARYGPTVAS ICAGGHVLLA 720
  721 NSSIKNIQRT HIDAMALVIY GLLLLQIIVL SWAPLMTFVL PPRNPNILTV NGHDSIVPEI 780
  781 FKKMKRMYEG DDDAERRSEI PIVYGLATVY SSITITFGIF LAMMMIVLLE PRAAIGLVIC 840
  841 VAVGAILLSV QGILRYRTAT SFESCVQPSF TALVGWFLLA HFCFFATSHQ TTLSQIDWRA 900
  901 AFVGRTSGIG QSNIISGALV ILNTFCGPIF FFSMYALLST ETFSLFALFP SLIRSCSNSG 960
  961 RSGSKTDPAA AMSDIANEAV GFDMTRGELT LYEYEDVFLG AGFKLATQFF MLQGLKIFCA1020
 1021 MLACTIHCRH LMVWKIFAPR FIYEALATFV SLPALMVGYV LLLRINRAVD TLIKRINKPK1080
 1081 

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