YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54636405, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTNVNMGG HMQVPQEGGG RFAFDLNSLP KLQSLPSPLE LIQLIRSAMR PWSVFFNVHN  60
   61 FKTAVSMPRL TSRVKRNLSY FQSNYIFVFI VLMIYCLITS PLILLVLAGA ALLCHRVRSR 120
  121 NVNITVMGTQ MTPRQQLIAV NLGATPLLFL VGAGALLFWT LGASFFVIAF HAIFYNIDAI 180
  181 VTEENEGFLA EVV

Type	Start	End	Confidence
Cytoplasmic	1	84	0.59
Transmembrane Helix	85	113	0.82
Non-Cytoplasmic	114	136	0.46
Transmembrane Helix	137	170	0.70
Cytoplasmic	171	193	0.47