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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125809513, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYVQEMLTLA CLVLLLGGLP HLTSTSTTTT LVAAMSIANQ DLERYFRAAN ATHTFASMEE  60
   61 RIAVDVYNYA FLNWSYVDHG NTLCETDFAL EQARYGEGRV LNVTGRLIHI SATDNVSDDY 120
  121 ACTPYIRGTM GAAMPDKGVV WIALVRRGRC TFEEKVKHVY QQNAAGVIIY NDKQVTQLEK 180
  181 MQIKGKTRNI AAVITYQNIG QDLAMTVDRG YIVNISIIEG RRGVRTVSSL NRTSVLFVSI 240
  241 SFIVLMIISL VWLIFYYIQR FRYMQAKDQQ SRNLCSVTKK AIMKIPTKTG KISDEKDLDS 300
  301 DCCAICIEAY KPTDTIRILP CKHEFHKNCI DPWLIEHRTC PMCKLDVLKF YGYVFLGSEE 360
  361 SILEYQPDRP DVARIVEVGP QGSGTDPGQG PPSTRPTALA DLIRSRDFVI DFPRVFVLES 420
  421 GSVVGAREML FPSRLPERSQ SSLSLRQARD WMSLMTNKLE EQQGLRRLRK DEMQQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle