YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54636274, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTPVSAASL SNANASSASA GSGATPIVPK TEPVGNEESS TMSLDFQTPG ITSTPNANKR  60
   61 PGFLDLNNKA AKNKRIIAPL VINSPDLQAK TVNTPDLEKI LLSNHMMQTP QPGKVFPTKV 120
  121 GPVTSEQEAF GKGFEEALQN LHTNSQAFPA SNPTANPTVT GTTMTAVNNG ISGGTFTYAN 180
  181 MGEGFPVIKD EPQNPAGSPT VSPIDMETQE KIKLERKRQR NRVAASKCRK RKLERISKLE 240
  241 DRVKILKGEN VDLGGIVKSL KDHVAQLKQQ VIEHMEAGCT VP

Type	Start	End	Confidence
Signal Peptide	1	20	0.93
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	282	0.99