YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54636165\|gb\|E...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRFFAKSL LYGLPLGITF FDCVGYVARV DGTSMQPALN PVADVRDYVF LLRWGNHNSD  60
   61 VERGDIISLV SPKDPGQKII KRVVGLQGDV VSTIGYRDPI VSVPQGHCWV EGDHTGHSMD 120
  121 SNTFGPVALG LMTAKAVAIV WPPERWRLLE NELPRRRAPI QVAKTSHYN

Type	Start	End	Confidence
Cytoplasmic	1	9	0.54
Transmembrane Helix	10	28	0.61
Non-Cytoplasmic	29	169	0.83