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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54636057|gb|E...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTESLSSLS DLELHRKLIQ CGFPSTPVTE TTRAVLIQKL KKHKKAEKLK RRSTKYALYS  60
   61 PEQREQPIFK YPQRLSAVDN NNDIELCRNP SVFNQRNYDE PDLNTLQMSP SKMYAPPPVV 120
  121 AANYDSECMP HNMNMNGTYR PQCSMPFSID SSNSYAKQSG KVKISDGGVV NRLLSFRDTT 180
  181 LQRKISPKVT HAAQMSRMPQ PRNGKFKRFV LSDLKSSFKN PDIRQYIIPQ MLIGLLVIFL 240
  241 AIITVLYTSK KFDQSPMDKT ALKYTLCNQN DLQLATEKVH CIGKESLKSS LLMSEELFKR 300
  301 LNERARLHHC TDASQSPSLD VSEFVRELVI NSKTPRANME SNLLAIQYLI SENPQWMINI 360
  361 LGTTGSANTL EQGSYFELSE PNLPLKCVVF KKIKRFFAVM GTLILVVFGV LMVYFGIVVY 420
  421 RMQQKKALVA VDQLTKDIIQ ELKNQSLQSE SPELTLNQLQ EKLVPSEKRS KQLSYWNKAI 480
  481 KMLEKIDSRV LFGMALRDGK TLRTIAWNRN LEKNELGKKW QISALDNSNK IANPPTPCLK 540
  541 VRHMFDLTEV EQPNLKQSIV ESIIEKVGPR CKICDVQLDI QSCCVYIRCA TEEDAGMIHN 600
  601 EINGWWFDNR LISIKFLRLE RYLSRFPKPA AEPPYFLPNE AANTHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle