YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195151217, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLILISML ALSCHGQHQH QHHNQHHSAN NIPRDEKPDH HRHEDLRETS TWIPILKYNK  60
   61 EQSEDGSYKT EYETGNNIIH EETGFLKDFD TNPNGVLVQH GQYSYQSPEG QLVNVQYTAD 120
  121 ENGFRATGDH IPTPPAIPEE IQKGLDQIYA GIKLQQERLE QRAKTDPDFA RKLEERRVAN 180
  181 QNGQYIGLLE NQ

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	192	0.99