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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54636020, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQDSSSDIAL VKILSEPTGN SRRRRLSWYY APSFLLLWVA LFYAIVIPLY NRLPDRVTVA  60
   61 DESQKPGQFV AERAQRQLYD FDRIGPKVVG SIANEVTTVA FLVNEAEKIR AEMRSDLYEL 120
  121 EVDVQAPSGG YVFIDMVNMY QGIHNVVVKL SAKSSQSASY LLLNSHFDSK PSSPGSGDDG 180
  181 TMVVVMLEVL RQMAISETPF EHPIIFLFNG AEENPLQGSH GFITQHKWAK NVKAFINLEV 240
  241 GGSGGRELLF QSGPNNPWLM KYYRTHALHP FATTMAEEIF QSGILPSDSD FRIFRDYGDV 300
  301 PGLDIAQVSN GYVYHTVFDT FEAVPGRSVQ NTGENILALV RAYTNATEMS NPEEYDEGHA 360
  361 VFFDFLGLFF VYYTETTGIV LNCVIAVISL GLVGVSLWRM ARVSEVGAGQ ISIWFGIILG 420
  421 LHVVGFALCL GLPLLMAVLF DAGDRSLTYF SSNWLVIGLY VCPAVIGLVL PLTLYYTLKP 480
  481 NGQLSHAYHL HMSLHAHCVI LAFLAIVLTS VSLRTPYLCL LSMIFYSGSL LVNLLSTLHD 540
  541 RGYYWTITVQ CLQLLPFCYF CYLFYTFLVI FFPVLGRNNS GTNPDLIIAL ICALCTFFAL 600
  601 GFVVQFINMF RWPKLILLGL GVVTFIFCMI AVSDVGFPYR PKTNVMRVNF LHTRRFFYEQ 660
  661 DGSVSHNDSG YYFDYQDRRE LNPLKDSSVN LSGLARVEPD CEKYVMCGIP CFYYSWCSQR 720
  721 TRAGWLPRET EVVLPEVELK FELLGKSVSE SDRTVRFDYE LAGPPHMNVF VQPLGGAKVE 780
  781 DWSFVRTMLD EPEEFSAPYQ IFFSYGKDDS PLKFYIVLSK SDGDFESPTL ELGIVGHYVS 840
  841 YDYERDPEAL EFIKSFPDYV HVMEWPSIFK RYIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle